Represents a neural pathway. More...

#include <WFiber.h>

Inheritance diagram for WFiber:

Collaboration diagram for WFiber:

Public Member Functions
	WFiber (const std::vector< WPosition > &points)
	Constructs a new fiber out of WPositions. More...

	WFiber ()
	Creates an empty fiber. More...

Public Member Functions inherited from WLine
	WLine (const std::vector< WPosition > &points)
	Generates a new line out of a sequence of points. More...

	WLine ()
	Creates an empty line. More...

void	resampleByNumberOfPoints (size_t numPoints)
	Resample this line so it has a number of given points afterwards. More...

void	resampleBySegmentLength (double newSegementLength)
	Resample this line so there are only segements of the given length. More...

void	resampleBySegmentLengthKeepShortFibers (double newSegmentLength)
	Resample this line so there are only segements of the given length. More...

void	reverseOrder ()
	Reverses the order of the points. More...

void	removeAdjacentDuplicates ()
	Collapse samplepoints which are equal and neighboured. More...

void	unifyDirectionBy (const WLine &other)
	Put the line into reverse ordering if the reverse ordering would have a similar direction to the given line. More...

Public Member Functions inherited from WMixinVector< WPosition >
	WMixinVector ()
	Empty standard constructor. More...

	WMixinVector (size_type initial_size, const value_type &fill_value=value_type())
	Constructs a vector of initial_size size where every emlement has its default value or the given value. More...

	WMixinVector (InputIterator first, InputIterator last)
	Constructs a new vector out of an iterator of another vector. More...

	WMixinVector (const vector_type &other)
	Copy constructor for the appropriate vector type. More...

	WMixinVector (const WMixinVector &other)
	Copy constructor for the WMixinVector itself. More...

WMixinVector &	operator= (const vector_type &other)
	Assignment operator for the appropriate vector type. More...

WMixinVector &	operator= (const WMixinVector &other)
	Assigment operator for the WMixinVector itself. More...

virtual	~WMixinVector ()
	Virtual Destructor. More...

void	clear ()
	Wrapper around std::vector member function. More...

void	resize (size_type new_size, const value_type &fill_value=value_type())
	Wrapper around std::vector member function. More...

void	reserve (size_type new_capacity)
	Wrapper around std::vector member function. More...

void	swap (vector_type &other)
	Allow also swap with vectors of an appropriate type. More...

void	swap (WMixinVector &other)
	Wrapper around std::vector member function. More...

bool	empty () const
	Wrapper around std::vector member function. More...

size_type	size () const
	Wrapper around std::vector member function. More...

size_type	capacity () const
	Wrapper around std::vector member function. More...

size_type	max_size () const
	Wrapper around std::vector member function. More...

allocator_type	get_allocator () const
	Returns its allocator. More...

const_iterator	begin () const
	Wrapper around std::vector member function. More...

iterator	begin ()
	Wrapper around std::vector member function. More...

const_iterator	end () const
	Wrapper around std::vector member function. More...

iterator	end ()
	Wrapper around std::vector member function. More...

const_reverse_iterator	rbegin () const
	Wrapper around std::vector member function. More...

reverse_iterator	rbegin ()
	Wrapper around std::vector member function. More...

const_reverse_iterator	rend () const
	Wrapper around std::vector member function. More...

reverse_iterator	rend ()
	Wrapper around std::vector member function. More...

const_reference	operator[] (size_type index) const
	Wrapper around std::vector member function. More...

reference	operator[] (size_type index)
	Wrapper around std::vector member function. More...

const_reference	at (size_type index) const
	Wrapper around std::vector member function. More...

reference	at (size_type index)
	Wrapper around std::vector member function. More...

void	assign (size_type count, const value_type &value)
	Wrapper around std::vector member function. More...

void	assign (Iter first, Iter last)
	Wrapper around std::vector member function. More...

void	push_back (const value_type &value)
	Wrapper around std::vector member function. More...

void	pop_back ()
	Wrapper around std::vector member function. More...

iterator	erase (iterator where)
	Wrapper around std::vector member function. More...

iterator	erase (iterator first, iterator last)
	Wrapper around std::vector member function. More...

iterator	insert (iterator where, const value_type &value)
	Wrapper around std::vector member function. More...

void	insert (iterator where, InputIterator first, InputIterator last)
	Wrapper around std::vector member function. More...

void	insert (iterator where, size_type count, const value_type &value)
	Wrapper around std::vector member function. More...

const_reference	back () const
	Wrapper around std::vector member function. More...

reference	back ()
	Wrapper around std::vector member function. More...

const_reference	front () const
	Wrapper around std::vector member function. More...

reference	front ()
	Wrapper around std::vector member function. More...

vector_type &	asVector ()
	Return this Mixin as its underlying real vector type. More...

const vector_type &	asVector () const
	Return this Mixin as its underlying real vector type. More...

Static Public Member Functions
static double	distDST (double thresholdSquare, const WFiber &q, const WFiber &r)
	This is the Smaller thresholded distance as described by Zhang: http://dx.doi.org/10.1109/TVCG.2008.52 . More...

static double	distDLT (double thresholdSquare, const WFiber &q, const WFiber &r)
	This is the Larger thresholded distance as described by Zhang: http://dx.doi.org/10.1109/TVCG.2008.52 . More...

Friends
class	WFiberTest
	Access for test class. More...

Additional Inherited Members
Public Types inherited from WMixinVector< WPosition >
typedef vector_type::allocator_type	allocator_type
	Compares to std::vector type. More...

typedef vector_type::value_type	value_type
	Compares to std::vector type. More...

typedef vector_type::const_pointer	const_pointer
	Compares to std::vector type. More...

typedef vector_type::pointer	pointer
	Compares to std::vector type. More...

typedef vector_type::const_reference	const_reference
	Compares to std::vector type. More...

typedef vector_type::reference	reference
	Compares to std::vector type. More...

typedef vector_type::const_iterator	const_iterator
	Compares to std::vector type. More...

typedef vector_type::iterator	iterator
	Compares to std::vector type. More...

typedef vector_type::const_reverse_iterator	const_reverse_iterator
	Compares to std::vector type. More...

typedef vector_type::reverse_iterator	reverse_iterator
	Compares to std::vector type. More...

typedef vector_type::size_type	size_type
	Compares to std::vector type. More...

typedef vector_type::difference_type	difference_type
	Compares to std::vector type. More...

Detailed Description

Represents a neural pathway.

Definition at line 39 of file WFiber.h.

Constructor & Destructor Documentation

◆ WFiber() [1/2]

WFiber::WFiber ( const std::vector< WPosition > & points )

explicit

Constructs a new fiber out of WPositions.

Parameters

points Reference to the points which belong to this fiber

Definition at line 88 of file WFiber.cpp.

◆ WFiber() [2/2]

WFiber::WFiber ( )

Creates an empty fiber.

Definition at line 93 of file WFiber.cpp.

Member Function Documentation

◆ distDLT()

double WFiber::distDLT	(	double	thresholdSquare,
		const WFiber &	q,
		const WFiber &	r
	)

static

This is the Larger thresholded distance as described by Zhang: http://dx.doi.org/10.1109/TVCG.2008.52 .

Parameters

thresholdSquare	Threshold upto which the distances should be ignored given as square for reasons of performance.
q	First fiber
r	Second fiber

Returns: The maximum of dt(Q,R) and dt(R,Q)

Definition at line 104 of file WFiber.cpp.

Referenced by WFiberTest::testDLTisSymmetric(), and WFiberTest::testDTMeasure().

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◆ distDST()

double WFiber::distDST	(	double	thresholdSquare,
		const WFiber &	q,
		const WFiber &	r
	)

static

This is the Smaller thresholded distance as described by Zhang: http://dx.doi.org/10.1109/TVCG.2008.52 .

Parameters

thresholdSquare	Threshold upto which the distances should be ignored given as square for reasons of performance.
q	First fiber
r	Second fiber

Returns: The minimum of dt(Q,R) and dt(R,Q)

Definition at line 98 of file WFiber.cpp.

Referenced by WFiberTest::testDSTisSymmetric(), and WFiberTest::testDTMeasure().

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Friends And Related Function Documentation

◆ WFiberTest

friend class WFiberTest

friend

Access for test class.

Definition at line 41 of file WFiber.h.

The documentation for this class was generated from the following files:

Public Member Functions

Static Public Member Functions

Friends

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ WFiber() [1/2]

◆ WFiber() [2/2]

Member Function Documentation

◆ distDLT()

◆ distDST()

Friends And Related Function Documentation

◆ WFiberTest