WHcoord Class Reference

this class to contain a seed voxel coordinate. More...

#include <WHcoord.h>

Collaboration diagram for WHcoord:

Public Member Functions
	WHcoord ()
	Constructor. More...
	WHcoord (coord_t x_init, coord_t y_init, coord_t z_init)
	Constructor. More...
	WHcoord (const WHcoord &object)
	Constructor. More...
	~WHcoord ()
	Destructor. More...
WHcoord &	operator= (const WHcoord &rhs)
	= member operator More...
float	getPhysDist (const WHcoord voxel) const
	returns the euclidean distance between this voxel and the input voxel More...
std::vector< WHcoord >	getPhysNbs (const WHcoord dataSize, const unsigned int nbLevel) const
	returns a vector containing the coordinates of the physical neighbours adjacent to the voxel, the neighbourhood level is defined by nb_level More...
std::string	getNameString () const
	returns a string with the coordinates of the voxel in the form "xxx_yyy_zzz" More...
WHcoord	nifti2vista (const WHcoord dataSize) const
	transform coordinates to vista format More...
WHcoord	surf2vista (const WHcoord dataSize) const
	transform coordinates to vista format More...
WHcoord	vista2nifti (const WHcoord dataSize) const
	transform coordinates to vista format More...

Public Attributes
coord_t	m_x
	x coordinate More...
coord_t	m_y
	y coordinate More...
coord_t	m_z
	z coordinate More...

Detailed Description

this class to contain a seed voxel coordinate.

consisting on x,y,z also implements coordinate gird changes and physical neighbor search

Definition at line 75 of file WHcoord.h.

Constructor & Destructor Documentation

WHcoord() [1/3]

WHcoord::WHcoord

(

)

Constructor.

Definition at line 60 of file WHcoord.cpp.

WHcoord() [2/3]

WHcoord::WHcoord	(	coord_t	x_init,
		coord_t	y_init,
		coord_t	z_init
	)

Constructor.

Parameters

x_init	x coordinate initializer
y_init	y coordinate initializer
z_init	z coordinate initializer

Definition at line 64 of file WHcoord.cpp.

WHcoord() [3/3]

WHcoord::WHcoord

(

const WHcoord &

object

)

Constructor.

Parameters

object

coordinate initializer

Definition at line 68 of file WHcoord.cpp.

~WHcoord()

WHcoord::~WHcoord

(

)

Destructor.

Definition at line 72 of file WHcoord.cpp.

Member Function Documentation

getNameString()

std::string WHcoord::getNameString

(

)

const

returns a string with the coordinates of the voxel in the form "xxx_yyy_zzz"

Returns

output string

Definition at line 205 of file WHcoord.cpp.

References m_x, m_y, and m_z.

Referenced by WHtree::getReport().

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getPhysDist()

float WHcoord::getPhysDist

(

const WHcoord

voxel

)

const

returns the euclidean distance between this voxel and the input voxel

Parameters

voxel

coordinate to calculate distance to

Returns

euclidean distance value

Definition at line 82 of file WHcoord.cpp.

References m_x, m_y, and m_z.

getPhysNbs()

std::vector< WHcoord > WHcoord::getPhysNbs	(	const WHcoord	dataSize,
		const unsigned int	nbLevel
	)		const

returns a vector containing the coordinates of the physical neighbours adjacent to the voxel, the neighbourhood level is defined by nb_level

Parameters

dataSize	dataset limits
nbLevel	neighborhood value

Returns

coordinate vector

Definition at line 91 of file WHcoord.cpp.

References m_x, m_y, and m_z.

nifti2vista()

WHcoord WHcoord::nifti2vista

(

const WHcoord

dataSize

)

const

transform coordinates to vista format

Parameters

dataSize

dataset size

Returns

converted coordinate

Definition at line 215 of file WHcoord.cpp.

References m_x, m_y, and m_z.

Referenced by WHtree::convert2grid(), and WHtree::writeTree().

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operator=()

WHcoord & WHcoord::operator=

(

const WHcoord &

rhs

)

= member operator

Parameters

rhs	object to copy

Returns

reference to copied object

Definition at line 248 of file WHcoord.cpp.

References m_x, m_y, and m_z.

surf2vista()

WHcoord WHcoord::surf2vista

(

const WHcoord

dataSize

)

const

transform coordinates to vista format

Parameters

dataSize

dataset size

Returns

converted coordinate

Definition at line 224 of file WHcoord.cpp.

References m_x, m_y, and m_z.

vista2nifti()

WHcoord WHcoord::vista2nifti

(

const WHcoord

dataSize

)

const

transform coordinates to vista format

Parameters

dataSize

dataset size

Returns

converted coordinate

Definition at line 233 of file WHcoord.cpp.

References m_x, m_y, and m_z.

Referenced by WHtree::convert2grid(), WHtree::writeTree(), and WHtree::writeTreeOldWalnut().

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Member Data Documentation

m_x

coord_t WHcoord::m_x

x coordinate

Definition at line 154 of file WHcoord.h.

Referenced by WHtreeProcesser::coarseTree(), WHtree::getMeanCoordinate4node(), getNameString(), getPhysDist(), getPhysNbs(), nifti2vista(), operator=(), surf2vista(), vista2nifti(), WHtree::writeTree(), and WHtree::writeTreeOldWalnut().

m_y

coord_t WHcoord::m_y

y coordinate

Definition at line 155 of file WHcoord.h.

Referenced by WHtreeProcesser::coarseTree(), WHtree::getMeanCoordinate4node(), getNameString(), getPhysDist(), getPhysNbs(), nifti2vista(), operator=(), surf2vista(), vista2nifti(), WHtree::writeTree(), and WHtree::writeTreeOldWalnut().

m_z

coord_t WHcoord::m_z

z coordinate

Definition at line 156 of file WHcoord.h.

Referenced by WHtreeProcesser::coarseTree(), WHtree::getMeanCoordinate4node(), getNameString(), getPhysDist(), getPhysNbs(), nifti2vista(), operator=(), surf2vista(), vista2nifti(), WHtree::writeTree(), and WHtree::writeTreeOldWalnut().

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The documentation for this class was generated from the following files:

• WHcoord.h
• WHcoord.cpp