This module is able to visualize connectome data in the context of MRI data. More...

#include <WMEffectiveConnectivityCluster.h>

Inheritance diagram for WMEffectiveConnectivityCluster:

Collaboration diagram for WMEffectiveConnectivityCluster:

Public Member Functions
	WMEffectiveConnectivityCluster ()
	Standard constructor. More...

	~WMEffectiveConnectivityCluster ()
	Destructor. More...

virtual const std::string	getName () const
	Gives back the name of this module. More...

virtual const std::string	getDescription () const
	Gives back a description of this module. More...

virtual std::shared_ptr< WModule >	factory () const
	Due to the prototype design pattern used to build modules, this method returns a new instance of this method. More...

virtual const char **	getXPMIcon () const
	Get the icon for this module in XPM format. More...

Public Member Functions inherited from WModuleContainer
	WModuleContainer (std::string name="Unnamed Module Container", std::string description="Used as container for several modules.")
	Constructor. More...

virtual	~WModuleContainer ()
	Destructor. More...

virtual void	add (std::shared_ptr< WModule > module, bool run=true)
	Add a module to this container and start it. More...

virtual WModule::SPtr	createAndAdd (std::string name)
	Convenience method to create a module instance with a given name and automatically add it to the container. More...

virtual void	remove (std::shared_ptr< WModule > module)
	Remove the given module from this container if it is associated with it. More...

virtual void	removeAll ()
	Removes all modules from this container. More...

virtual void	stop ()
	Stops all modules inside this container. More...

virtual void	addDefaultNotifier (MODULE_SIGNAL signal, t_ModuleErrorSignalHandlerType notifier)
	Add a specified notifier to the list of default notifiers which get connected to each added module. More...

virtual void	addDefaultNotifier (MODULE_SIGNAL signal, t_ModuleGenericSignalHandlerType notifier)
	Add a specified notifier to the list of default notifiers which get connected to each added module. More...

virtual void	addDefaultNotifier (MODULE_CONNECTOR_SIGNAL signal, t_GenericSignalHandlerType notifier)
	Add a specified notifier to the list of default notifiers which get connected to each added module. More...

virtual std::shared_ptr< WModule >	applyModule (std::shared_ptr< WModule > applyOn, std::string what, bool tryOnly=false)
	Function combines two modules. More...

virtual std::shared_ptr< WModule >	applyModule (std::shared_ptr< WModule > applyOn, std::shared_ptr< WModule > prototype)
	Function combines two modules. More...

WBatchLoader::SPtr	loadDataSets (std::vector< std::string > filenames, bool suppressColormaps=false)
	Load specified datasets. More...

WBatchLoader::SPtr	loadDataSetsSynchronously (std::vector< std::string > filenames, bool suppressColormaps=false)
	Loads the specified files synchronously. More...

void	addPendingThread (std::shared_ptr< WThreadedRunner > thread)
	Add the specified thread to the list of pending jobs. More...

void	finishedPendingThread (std::shared_ptr< WThreadedRunner > thread)
	The specified thread has finished and does not longer depend upon this container instance. More...

void	setCrashIfModuleCrashes (bool crashIfCrashed=true)
	Sets a flag denoting whether the container (which also is a module) should be marked as "crashed" if a nested module crashes. More...

DataModuleListType	getDataModules ()
	Returns a vector of pointers to the loaded data modules in the container. More...

ModuleSharedContainerType::ReadTicket	getModules () const
	Method returns a read ticket allowing read-access to the list of modules inside the container. More...

ModuleVectorType	getModules (std::string name) const
	Queries the container to find all modules with a given name. More...

WCombinerTypes::WCompatiblesList	getPossibleConnections (std::shared_ptr< WModule > module)
	This method creates a list of combiner instances, for each possible connection that can be made between the specified module and the module currently inside the container. More...

Public Member Functions inherited from WModule
	WModule ()
	Constructs a new WModule instance. More...

virtual	~WModule ()
	Destructor. More...

const InputConnectorList &	getInputConnectors () const
	Gives back input connectors. More...

std::shared_ptr< WModuleInputConnector >	getInputConnector (std::string name)
	Finds the named connector for the module. More...

std::shared_ptr< WModuleInputConnector >	findInputConnector (std::string name)
	Finds the named connector for the module. More...

const OutputConnectorList &	getOutputConnectors () const
	Gives back output connectors. More...

std::shared_ptr< WModuleOutputConnector >	getOutputConnector (std::string name)
	Finds the named connector for the module. More...

std::shared_ptr< WModuleOutputConnector >	findOutputConnector (std::string name)
	Finds the named connector for the module. More...

std::shared_ptr< WModuleConnector >	getConnector (std::string name)
	Finds the named connector for the module. More...

std::shared_ptr< WModuleConnector >	findConnector (std::string name)
	Finds the named connector for the module. More...

std::shared_ptr< WProperties >	getProperties () const
	Return a pointer to the properties object of the module. More...

std::shared_ptr< WProperties >	getInformationProperties () const
	Return a pointer to the information properties object of the module. More...

const WBoolFlag &	isInitialized () const
	Determines whether the module instance is properly initialized. More...

const WBoolFlag &	isUseable () const
	Checks whether the module instance is ready to be used. More...

const WBoolFlag &	isAssociated () const
	Checks whether this module is associated with an container. More...

const WBoolFlag &	isReady () const
	Checks whether this module is ready. More...

const WBoolFlag &	isReadyOrCrashed () const
	This is the logical or of isReady and isCrashed. More...

const WBoolFlag &	isRunning () const
	Returns a flag denoting whether the thread currently is running or nor. More...

void	waitRestored ()
	This method waits for the module to be restored completely. More...

bool	isRestoreNeeded () const
	Check whether this module is in restore mode. More...

void	setRestoreNeeded (bool restore=true)
	Change the restore mode. More...

void	reportRestoreComplete ()
	Called by loaders to tell the module that loading has been completed. More...

std::shared_ptr< WModuleContainer >	getAssociatedContainer () const
	The container this module is associated with. More...

virtual boost::signals2::connection	subscribeSignal (MODULE_SIGNAL signal, t_ModuleGenericSignalHandlerType notifier)
	Connects a specified notify function with a signal this module instance is offering. More...

virtual boost::signals2::connection	subscribeSignal (MODULE_SIGNAL signal, t_ModuleErrorSignalHandlerType notifier)
	Connects a specified notify function with a signal this module instance is offering. More...

virtual std::shared_ptr< WProgressCombiner >	getRootProgressCombiner ()
	Gets the modules base progress. More...

virtual MODULE_TYPE	getType () const
	Gets the type of the module. More...

void	disconnect ()
	Completely disconnects all connected connectors of this module. More...

WCombinerTypes::WDisconnectList	getPossibleDisconnections ()
	Gives a list of all WDisconnectCombiners possible. More...

boost::filesystem::path	getLocalPath () const
	Returns the local path of the module. More...

boost::filesystem::path	getLibPath () const
	Returns the absolute path to the library containing this module. More...

std::string	getPackageName () const
	Returns the name of the package the module belongs to, The package name basically is the name of the library containing this and maybe other modules. More...

bool	isDeprecated () const
	Checks whether the module was marked as deprecated. More...

std::string	getDeprecationMessage () const
	Queries the deprecation message of a module if specified. More...

virtual WModuleMetaInformation::ConstSPtr	getMetaInformation () const
	The meta information of this module. More...

const std::string &	getUUID () const
	Get the UUID of the module instance. More...

WPropString	getRuntimeName () const
	Returns the name the user has given this module. More...

const WRequirement *	checkRequirements () const
	This method checks whether all the requirements of the module are complied. More...

virtual boost::signals2::connection	subscribeSignal (THREAD_SIGNAL signal, t_ThreadErrorSignalHandlerType notifier)
	Connects a specified notify function with a signal this thread instance is offering. More...

Public Member Functions inherited from WThreadedRunner
	WThreadedRunner ()
	Default constructor. More...

virtual	~WThreadedRunner ()
	Destructor. More...

virtual void	run ()
	Run thread. More...

void	run (THREADFUNCTION f)
	Run thread. More...

void	wait (bool requestFinish=false)
	Wait for the thread to be finished. More...

virtual void	requestStop ()
	This method's purpose is to request a stop without waiting for it. More...

virtual boost::signals2::connection	subscribeSignal (THREAD_SIGNAL signal, t_ThreadErrorSignalHandlerType notifier)
	Connects a specified notify function with a signal this thread instance is offering. More...

const WBoolFlag &	isCrashed () const
	Checks whether this thread has been crashed. More...

const std::string &	getCrashMessage () const
	Get the message of the exception finally causing the crash. More...

void	setThreadName (std::string name)
	Set the name of the thread. More...

std::string	getThreadName () const
	Returns the current thread name. More...

Public Member Functions inherited from WPrototyped
	WPrototyped ()
	Default constructor. More...

virtual	~WPrototyped ()
	Destructor. More...

template<typename T >
bool	isA ()
	Checks whether the actual prototype has the specified runtime type. More...

Protected Member Functions
virtual void	moduleMain ()
	Entry point after loading the module. More...

virtual void	connectors ()
	Initialize the connectors this module is using. More...

virtual void	properties ()
	Initialize the properties for this module. More...

virtual void	activate ()
	Callback for m_active. More...

void	fiberDataChange (std::shared_ptr< WModuleConnector > input, std::shared_ptr< WModuleConnector > output)
	This method is called whenever the data on the fiberSelection module output changes. More...

Protected Member Functions inherited from WModuleContainer
virtual void	moduleError (std::shared_ptr< WModule > module, const WException &exception)
	This method is called whenever a module inside the container crashes. More...

Protected Member Functions inherited from WModule
void	threadMain ()
	Thread entry point. More...

virtual void	onThreadException (const WException &e)
	This method is called if an exception was caught, which came from the custom thread code. More...

void	setAssociatedContainer (std::shared_ptr< WModuleContainer > container)
	Sets the container this module is associated with. More...

virtual void	requirements ()
	Initialize requirements in this function. More...

virtual std::string	deprecated () const
	This function allows module programmers to mark their modules deprecated in a user-friendly way. More...

void	initialize ()
	Manages initialization. More...

virtual void	cleanup ()
	Called whenever the module should shutdown. More...

void	addConnector (std::shared_ptr< WModuleInputConnector > con)
	Adds the specified connector to the list of inputs. More...

void	addConnector (std::shared_ptr< WModuleOutputConnector > con)
	Adds the specified connector to the list of outputs. More...

void	removeConnectors ()
	Removes all connectors properly. More...

virtual const t_GenericSignalHandlerType	getSignalHandler (MODULE_CONNECTOR_SIGNAL signal)
	Gives the signal handler function responsible for a given signal. More...

virtual void	notifyConnectionEstablished (std::shared_ptr< WModuleConnector > here, std::shared_ptr< WModuleConnector > there)
	Gets called whenever a connector gets connected to the specified input. More...

virtual void	notifyConnectionClosed (std::shared_ptr< WModuleConnector > here, std::shared_ptr< WModuleConnector > there)
	Gets called whenever a connection between a remote and local connector gets closed. More...

virtual void	notifyDataChange (std::shared_ptr< WModuleConnector > input, std::shared_ptr< WModuleConnector > output)
	Gets called when the data on one input connector changed. More...

void	ready ()
	Call this whenever your module is ready and can react on property changes. More...

wlog::WStreamedLogger	infoLog () const
	Logger instance for comfortable info logging. More...

wlog::WStreamedLogger	debugLog () const
	Logger instance for comfortable debug logging. More...

wlog::WStreamedLogger	warnLog () const
	Logger instance for comfortable warning- logs. More...

wlog::WStreamedLogger	errorLog () const
	Logger instance for comfortable error logging. More...

void	setLocalPath (boost::filesystem::path path)
	Sets the local module path. More...

void	setLibPath (boost::filesystem::path path)
	Set the path to the library which contains this module. More...

void	setPackageName (std::string name)
	Set the package name. More...

Protected Member Functions inherited from WThreadedRunner
virtual void	notifyStop ()
	Gets called when the thread should be stopped. More...

void	yield () const
	Give remaining execution timeslice to another thread. More...

void	sleep (const int32_t t) const
	Sets thread asleep. More...

void	msleep (const int32_t t) const
	Sets thread asleep. More...

void	waitForStop ()
	Let the thread sleep until a stop request was given. More...

void	handleDeadlyException (const WException &e, std::string sender="WThreadedRunner")
	Handle the specified exception which was not caught in the thread, which basically means the thread has crashed. More...

Private Attributes
std::shared_ptr< WModuleInputForwardData< WDataSetFibers > >	m_fiberInput
	The fiber dataset used. More...

std::shared_ptr< WModuleInputForwardData< WDataSetSingle > >	m_VOI1
	The volume of interest 1. More...

std::shared_ptr< WModuleInputForwardData< WDataSetSingle > >	m_VOI2
	The volume of interest 2. More...

std::shared_ptr< WModuleOutputForwardData< WDataSetScalar > >	m_paramOutput
	The parameter dataset used. More...

std::shared_ptr< WModuleOutputForwardData< WDataSetScalar > >	m_voxelOutput
	The voxelized fibers used. More...

std::shared_ptr< WModuleOutputForwardData< WDataSetFibers > >	m_fiberOutput
	The fibers used. More...

std::shared_ptr< WModule >	m_fiberSelection
	The fiber selection module. More...

std::shared_ptr< WModule >	m_voxelizer
	The voxelizer module. More...

std::shared_ptr< WModule >	m_gauss
	The Gauss filter which filters the voxelized fibers. More...

std::shared_ptr< WModule >	m_animation
	The final animation. More...

WPosition	m_labelPos1
	The position of the first label showing m_voi1Name. More...

WPosition	m_labelPos2
	The position of the second label showing m_voi2Name. More...

WPropString	m_voi1Name
	The name of the first region of interest. More...

WPropString	m_voi2Name
	The name of the first region of interest. More...

WPropInt	m_labelCharacterSize
	Size of the label font. More...

bool	m_labelActive
	True if the labels should be drawn. More...

std::shared_ptr< WCondition >	m_propCondition
	A condition used to notify about changes in several properties. More...

osg::ref_ptr< WGEGroupNode >	m_rootNode
	The root node used for this modules graphics. More...

Additional Inherited Members
Public Types inherited from WModuleContainer
typedef std::vector< std::shared_ptr< WModule > >	ModuleVectorType
	A vector of modules. More...

typedef std::set< std::shared_ptr< WModule > >	ModuleContainerType
	For shortening: a type defining a shared vector of WModule pointers. More...

typedef WSharedObject< ModuleContainerType >	ModuleSharedContainerType
	The alias for a shared container. More...

typedef ModuleContainerType::const_iterator	ModuleConstIterator
	The const iterator type of the container. More...

typedef ModuleContainerType::iterator	ModuleIterator
	The iterator type of the container. More...

typedef std::set< std::shared_ptr< WDataModule > >	DataModuleListType
	Simple type for WDataModule pointer lists. More...

Public Types inherited from WModule
typedef std::vector< std::shared_ptr< WModuleInputConnector > >	InputConnectorList
	The type for the list of input connectors. More...

typedef std::vector< std::shared_ptr< WModuleOutputConnector > >	OutputConnectorList
	The type for the list of output connectors. More...

typedef std::shared_ptr< WModule >	SPtr
	Shared pointer to a WModule. More...

typedef std::shared_ptr< const WModule >	ConstSPtr
	Shared pointer to a const WModule. More...

Public Types inherited from WThreadedRunner
typedef std::shared_ptr< WThreadedRunner >	SPtr
	Abbreviation to a shared_ptr to this type. More...

typedef std::shared_ptr< const WThreadedRunner >	ConstSPtr
	Abbreviation to a const shared_ptr to this type. More...

typedef boost::function< void(void) >	THREADFUNCTION
	Type used for simple thread functions. More...

Static Public Member Functions inherited from WModule
static SPtr	findByUUID (std::string uuid)
	Find a module instance by UUID. More...

Static Public Member Functions inherited from WThreadedRunner
static void	setThisThreadName (std::string name)
	Static function to set the name of the calling thread. More...

Protected Types inherited from WModule
typedef std::vector< WRequirement * >	Requirements
	The type of the requirement list. More...

Protected Attributes inherited from WModuleContainer
ModuleSharedContainerType	m_modules
	The modules associated with this container. More...

std::string	m_name
	Name of the module. More...

std::string	m_description
	Description of the module. More...

std::shared_mutex	m_errorNotifiersLock
	Lock for error notifiers set. More...

std::list< t_ModuleErrorSignalHandlerType >	m_errorNotifiers
	The error notifiers connected to added modules by default. More...

std::shared_mutex	m_readyNotifiersLock
	Lock for ready notifiers set. More...

std::list< t_ModuleGenericSignalHandlerType >	m_readyNotifiers
	The ready notifiers connected to added modules by default. More...

std::shared_mutex	m_associatedNotifiersLock
	Lock for associated notifiers set. More...

std::list< t_ModuleGenericSignalHandlerType >	m_associatedNotifiers
	The notifiers connected to added modules by default and fired whenever the module got associated. More...

std::shared_mutex	m_removedNotifiersLock
	Lock for remove-notifiers set. More...

std::list< t_ModuleGenericSignalHandlerType >	m_removedNotifiers
	The notifiers connected to added modules by default and fired whenever the module got removed again. More...

std::shared_mutex	m_connectorNotifiersLock
	Lock for connector-notifiers set. More...

std::list< t_GenericSignalHandlerType >	m_connectorEstablishedNotifiers
	The notifiers connected to added modules by default and fired whenever the module connectors got connected. More...

std::list< t_GenericSignalHandlerType >	m_connectorClosedNotifiers
	The notifiers connected to added modules by default and fired whenever the module connectors got disconnected. More...

std::set< std::shared_ptr< WThreadedRunner > >	m_pendingThreads
	Set of all threads that currently depend upon this container. More...

std::shared_mutex	m_pendingThreadsLock
	Lock for m_pendingThreads. More...

bool	m_crashIfModuleCrashes
	This flag denotes whether the whole container should be marked as crashed if one of the contained modules crashes. More...

Protected Attributes inherited from WModule
std::shared_ptr< WProperties >	m_properties
	The property object for the module. More...

std::shared_ptr< WProperties >	m_infoProperties
	The property object for the module containing only module whose purpose is "PV_PURPOSE_INFORMNATION". More...

std::shared_ptr< WProgressCombiner >	m_progress
	Progress indicator used as parent for all progress' of this module. More...

WBoolFlag	m_initialized
	True if everything is initialized and ready to be used. More...

WBoolFlag	m_isAssociated
	True if container got associated with this flag. More...

WBoolFlag	m_isUsable
	True if associated && initialized. More...

WBoolFlag	m_isReady
	True if ready() was called. More...

WBoolFlag	m_isReadyOrCrashed
	It is true whenever m_isReady or WThreadedRunner::m_isCrashed is true. More...

WBoolFlag	m_isRunning
	True if the module currently is running. More...

WBoolFlag	m_isLoadFinished
	Flag to denote whether the module container and the project loader have finished their work. More...

bool	m_restoreMode
	Flag denoting the current restore mode. More...

std::shared_ptr< WProgress >	m_readyProgress
	Progress indicator for the "ready" state. More...

WConditionSet	m_moduleState
	The internal state of the module. More...

std::shared_ptr< WModuleContainer >	m_container
	The container this module belongs to. More...

InputConnectorList	m_inputConnectors
	Set of input connectors associated with this module. More...

OutputConnectorList	m_outputConnectors
	Set of output connectors associated with this module. More...

WPropBool	m_active
	True whenever the module should be active. More...

WPropString	m_runtimeName
	This property holds a user specified name for the current module instance. More...

boost::filesystem::path	m_localPath
	The path where the module binary resides in. More...

boost::filesystem::path	m_libPath
	The absolute path to the library containing this module. More...

std::string	m_packageName
	The name of the lib/the package containing this module. More...

Requirements	m_requirements
	The list of requirements. More...

Protected Attributes inherited from WThreadedRunner
boost::thread	m_thread
	Thread instance. More...

WBoolFlag	m_shutdownFlag
	Condition getting fired whenever the thread should quit. More...

WBoolFlag	m_isCrashed
	True whenever an exception is thrown during threadMain. More...

std::string	m_crashMessage
	The crash message. More...

Detailed Description

This module is able to visualize connectome data in the context of MRI data.

It uses the module container class to allow the module to be composed from other modules.

Definition at line 49 of file WMEffectiveConnectivityCluster.h.

Constructor & Destructor Documentation

◆ WMEffectiveConnectivityCluster()

WMEffectiveConnectivityCluster::WMEffectiveConnectivityCluster ( )

Standard constructor.

Definition at line 59 of file WMEffectiveConnectivityCluster.cpp.

Referenced by factory().

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◆ ~WMEffectiveConnectivityCluster()

WMEffectiveConnectivityCluster::~WMEffectiveConnectivityCluster ( )

Destructor.

Definition at line 70 of file WMEffectiveConnectivityCluster.cpp.

References WModule::removeConnectors().

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Member Function Documentation

◆ activate()

void WMEffectiveConnectivityCluster::activate ( )

protectedvirtual

Callback for m_active.

Overwrite this in your modules to handle m_active changes separately.

Reimplemented from WModule.

Definition at line 405 of file WMEffectiveConnectivityCluster.cpp.

References WModule::m_active, and m_animation.

◆ connectors()

void WMEffectiveConnectivityCluster::connectors ( )

protectedvirtual

Initialize the connectors this module is using.

Reimplemented from WModule.

Definition at line 337 of file WMEffectiveConnectivityCluster.cpp.

References WModule::addConnector(), WModule::connectors(), m_fiberInput, m_fiberOutput, m_paramOutput, m_VOI1, m_VOI2, and m_voxelOutput.

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◆ factory()

std::shared_ptr< WModule > WMEffectiveConnectivityCluster::factory ( ) const

virtual

Due to the prototype design pattern used to build modules, this method returns a new instance of this method.

NOTE: it should never be initialized or modified in some other way. A simple new instance is required.

Returns: the prototype used to create every module in OpenWalnut.

Reimplemented from WModuleContainer.

Definition at line 76 of file WMEffectiveConnectivityCluster.cpp.

References WMEffectiveConnectivityCluster().

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◆ fiberDataChange()

void WMEffectiveConnectivityCluster::fiberDataChange	(	std::shared_ptr< WModuleConnector >	input,
		std::shared_ptr< WModuleConnector >	output
	)

protected

This method is called whenever the data on the fiberSelection module output changes.

Parameters

input	this is the input receiving the change, in this case, the voxelizer
output	this is the sender, the fiberSelection module.

Definition at line 96 of file WMEffectiveConnectivityCluster.cpp.

References WModule::errorLog(), m_labelActive, m_labelPos1, m_labelPos2, and m_propCondition.

Referenced by moduleMain().

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◆ getDescription()

const std::string WMEffectiveConnectivityCluster::getDescription ( ) const

virtual

Gives back a description of this module.

Returns: description of module.

Reimplemented from WModuleContainer.

Definition at line 91 of file WMEffectiveConnectivityCluster.cpp.

References WModuleContainer::getDescription().

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◆ getName()

const std::string WMEffectiveConnectivityCluster::getName ( ) const

virtual

Gives back the name of this module.

Returns: the module's name.

Reimplemented from WModuleContainer.

Definition at line 86 of file WMEffectiveConnectivityCluster.cpp.

References WModuleContainer::getName().

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◆ getXPMIcon()

const char ** WMEffectiveConnectivityCluster::getXPMIcon ( ) const

virtual

Get the icon for this module in XPM format.

Returns: the icon.

Reimplemented from WModule.

Definition at line 81 of file WMEffectiveConnectivityCluster.cpp.

◆ moduleMain()

void WMEffectiveConnectivityCluster::moduleMain ( )

protectedvirtual

Entry point after loading the module.

Runs in separate thread.

Reimplemented from WModuleContainer.

Definition at line 128 of file WMEffectiveConnectivityCluster.cpp.

References WConditionSet::add(), WModuleContainer::add(), fiberDataChange(), WKernel::getGraphicsEngine(), WModuleFactory::getModuleFactory(), WKernel::getRunningKernel(), WModule::m_active, m_animation, m_fiberInput, m_fiberOutput, m_fiberSelection, m_gauss, m_labelActive, m_labelCharacterSize, m_labelPos1, m_labelPos2, WModule::m_moduleState, m_paramOutput, m_propCondition, WModule::m_properties, m_rootNode, WThreadedRunner::m_shutdownFlag, m_VOI1, m_voi1Name, m_VOI2, m_voi2Name, m_voxelizer, m_voxelOutput, WModule::ready(), WConditionSet::setResetable(), WModuleContainer::stop(), and WConditionSet::wait().

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◆ properties()

void WMEffectiveConnectivityCluster::properties ( )

protectedvirtual

Initialize the properties for this module.

Reimplemented from WModule.

Definition at line 392 of file WMEffectiveConnectivityCluster.cpp.

References m_labelCharacterSize, m_propCondition, WModule::m_properties, m_voi1Name, m_voi2Name, and WModule::properties().

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Member Data Documentation

◆ m_animation

std::shared_ptr< WModule > WMEffectiveConnectivityCluster::m_animation

private

The final animation.

Definition at line 153 of file WMEffectiveConnectivityCluster.h.

Referenced by activate(), and moduleMain().

◆ m_fiberInput

std::shared_ptr< WModuleInputForwardData< WDataSetFibers > > WMEffectiveConnectivityCluster::m_fiberInput

private

The fiber dataset used.

Definition at line 122 of file WMEffectiveConnectivityCluster.h.

Referenced by connectors(), and moduleMain().

◆ m_fiberOutput

std::shared_ptr< WModuleOutputForwardData< WDataSetFibers > > WMEffectiveConnectivityCluster::m_fiberOutput

private

The fibers used.

Definition at line 147 of file WMEffectiveConnectivityCluster.h.

Referenced by connectors(), and moduleMain().

◆ m_fiberSelection

std::shared_ptr< WModule > WMEffectiveConnectivityCluster::m_fiberSelection

private

The fiber selection module.

Definition at line 150 of file WMEffectiveConnectivityCluster.h.

Referenced by moduleMain().

◆ m_gauss

std::shared_ptr< WModule > WMEffectiveConnectivityCluster::m_gauss

private

The Gauss filter which filters the voxelized fibers.

Definition at line 152 of file WMEffectiveConnectivityCluster.h.

Referenced by moduleMain().

◆ m_labelActive

bool WMEffectiveConnectivityCluster::m_labelActive

private

True if the labels should be drawn.

Definition at line 187 of file WMEffectiveConnectivityCluster.h.

Referenced by fiberDataChange(), and moduleMain().

◆ m_labelCharacterSize

WPropInt WMEffectiveConnectivityCluster::m_labelCharacterSize

private

Size of the label font.

Definition at line 182 of file WMEffectiveConnectivityCluster.h.

Referenced by moduleMain(), and properties().

◆ m_labelPos1

WPosition WMEffectiveConnectivityCluster::m_labelPos1

private

The position of the first label showing m_voi1Name.

Definition at line 158 of file WMEffectiveConnectivityCluster.h.

Referenced by fiberDataChange(), and moduleMain().

◆ m_labelPos2

WPosition WMEffectiveConnectivityCluster::m_labelPos2

private

The position of the second label showing m_voi2Name.

Definition at line 163 of file WMEffectiveConnectivityCluster.h.

Referenced by fiberDataChange(), and moduleMain().

◆ m_paramOutput

std::shared_ptr< WModuleOutputForwardData< WDataSetScalar > > WMEffectiveConnectivityCluster::m_paramOutput

private

The parameter dataset used.

Definition at line 137 of file WMEffectiveConnectivityCluster.h.

Referenced by connectors(), and moduleMain().

◆ m_propCondition

std::shared_ptr< WCondition > WMEffectiveConnectivityCluster::m_propCondition

private

A condition used to notify about changes in several properties.

Definition at line 192 of file WMEffectiveConnectivityCluster.h.

Referenced by fiberDataChange(), moduleMain(), and properties().

◆ m_rootNode

osg::ref_ptr< WGEGroupNode > WMEffectiveConnectivityCluster::m_rootNode

private

The root node used for this modules graphics.

For OSG nodes, always use osg::ref_ptr to ensure proper resource management.

Definition at line 201 of file WMEffectiveConnectivityCluster.h.

Referenced by moduleMain().

◆ m_VOI1

std::shared_ptr< WModuleInputForwardData< WDataSetSingle > > WMEffectiveConnectivityCluster::m_VOI1

private

The volume of interest 1.

Definition at line 127 of file WMEffectiveConnectivityCluster.h.

Referenced by connectors(), and moduleMain().

◆ m_voi1Name

WPropString WMEffectiveConnectivityCluster::m_voi1Name

private

The name of the first region of interest.

Definition at line 172 of file WMEffectiveConnectivityCluster.h.

Referenced by moduleMain(), and properties().

◆ m_VOI2

std::shared_ptr< WModuleInputForwardData< WDataSetSingle > > WMEffectiveConnectivityCluster::m_VOI2

private

The volume of interest 2.

Definition at line 132 of file WMEffectiveConnectivityCluster.h.

Referenced by connectors(), and moduleMain().

◆ m_voi2Name

WPropString WMEffectiveConnectivityCluster::m_voi2Name

private

The name of the first region of interest.

Definition at line 177 of file WMEffectiveConnectivityCluster.h.

Referenced by moduleMain(), and properties().

◆ m_voxelizer

std::shared_ptr< WModule > WMEffectiveConnectivityCluster::m_voxelizer

private

The voxelizer module.

Definition at line 151 of file WMEffectiveConnectivityCluster.h.

Referenced by moduleMain().

◆ m_voxelOutput

std::shared_ptr< WModuleOutputForwardData< WDataSetScalar > > WMEffectiveConnectivityCluster::m_voxelOutput

private

The voxelized fibers used.

Definition at line 142 of file WMEffectiveConnectivityCluster.h.

Referenced by connectors(), and moduleMain().

The documentation for this class was generated from the following files:

Public Member Functions

Protected Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ WMEffectiveConnectivityCluster()

◆ ~WMEffectiveConnectivityCluster()

Member Function Documentation

◆ activate()

◆ connectors()

◆ factory()

◆ fiberDataChange()

◆ getDescription()

◆ getName()

◆ getXPMIcon()

◆ moduleMain()

◆ properties()

Member Data Documentation

◆ m_animation

◆ m_fiberInput

◆ m_fiberOutput

◆ m_fiberSelection

◆ m_gauss

◆ m_labelActive

◆ m_labelCharacterSize

◆ m_labelPos1

◆ m_labelPos2

◆ m_paramOutput

◆ m_propCondition

◆ m_rootNode

◆ m_VOI1

◆ m_voi1Name

◆ m_VOI2

◆ m_voi2Name

◆ m_voxelizer

◆ m_voxelOutput