Traces a given set of deterministic tracts as given by a dataset of deterministic tracts (optionally only a subset may be processed) in a voxel-wise manner. More...

#include <WMVoxelizer.h>

Inheritance diagram for WMVoxelizer:

Collaboration diagram for WMVoxelizer:

Public Member Functions
	WMVoxelizer ()
	Default Constructor. More...

virtual	~WMVoxelizer ()
	Default Destructor. More...

virtual const std::string	getName () const
	Gives back the name of this module. More...

virtual const std::string	getDescription () const
	Gives back a description of this module. More...

virtual std::shared_ptr< WModule >	factory () const
	Due to the prototype design pattern used to build modules, this method returns a new instance of this method. More...

Public Member Functions inherited from WModule
	WModule ()
	Constructs a new WModule instance. More...

virtual	~WModule ()
	Destructor. More...

const InputConnectorList &	getInputConnectors () const
	Gives back input connectors. More...

std::shared_ptr< WModuleInputConnector >	getInputConnector (std::string name)
	Finds the named connector for the module. More...

std::shared_ptr< WModuleInputConnector >	findInputConnector (std::string name)
	Finds the named connector for the module. More...

const OutputConnectorList &	getOutputConnectors () const
	Gives back output connectors. More...

std::shared_ptr< WModuleOutputConnector >	getOutputConnector (std::string name)
	Finds the named connector for the module. More...

std::shared_ptr< WModuleOutputConnector >	findOutputConnector (std::string name)
	Finds the named connector for the module. More...

std::shared_ptr< WModuleConnector >	getConnector (std::string name)
	Finds the named connector for the module. More...

std::shared_ptr< WModuleConnector >	findConnector (std::string name)
	Finds the named connector for the module. More...

std::shared_ptr< WProperties >	getProperties () const
	Return a pointer to the properties object of the module. More...

std::shared_ptr< WProperties >	getInformationProperties () const
	Return a pointer to the information properties object of the module. More...

const WBoolFlag &	isInitialized () const
	Determines whether the module instance is properly initialized. More...

const WBoolFlag &	isUseable () const
	Checks whether the module instance is ready to be used. More...

const WBoolFlag &	isAssociated () const
	Checks whether this module is associated with an container. More...

const WBoolFlag &	isReady () const
	Checks whether this module is ready. More...

const WBoolFlag &	isReadyOrCrashed () const
	This is the logical or of isReady and isCrashed. More...

const WBoolFlag &	isRunning () const
	Returns a flag denoting whether the thread currently is running or nor. More...

void	waitRestored ()
	This method waits for the module to be restored completely. More...

bool	isRestoreNeeded () const
	Check whether this module is in restore mode. More...

void	setRestoreNeeded (bool restore=true)
	Change the restore mode. More...

void	reportRestoreComplete ()
	Called by loaders to tell the module that loading has been completed. More...

std::shared_ptr< WModuleContainer >	getAssociatedContainer () const
	The container this module is associated with. More...

virtual boost::signals2::connection	subscribeSignal (MODULE_SIGNAL signal, t_ModuleGenericSignalHandlerType notifier)
	Connects a specified notify function with a signal this module instance is offering. More...

virtual boost::signals2::connection	subscribeSignal (MODULE_SIGNAL signal, t_ModuleErrorSignalHandlerType notifier)
	Connects a specified notify function with a signal this module instance is offering. More...

virtual std::shared_ptr< WProgressCombiner >	getRootProgressCombiner ()
	Gets the modules base progress. More...

virtual const char **	getXPMIcon () const
	Get the icon for this module in XPM format. More...

virtual MODULE_TYPE	getType () const
	Gets the type of the module. More...

void	disconnect ()
	Completely disconnects all connected connectors of this module. More...

WCombinerTypes::WDisconnectList	getPossibleDisconnections ()
	Gives a list of all WDisconnectCombiners possible. More...

boost::filesystem::path	getLocalPath () const
	Returns the local path of the module. More...

boost::filesystem::path	getLibPath () const
	Returns the absolute path to the library containing this module. More...

std::string	getPackageName () const
	Returns the name of the package the module belongs to, The package name basically is the name of the library containing this and maybe other modules. More...

bool	isDeprecated () const
	Checks whether the module was marked as deprecated. More...

std::string	getDeprecationMessage () const
	Queries the deprecation message of a module if specified. More...

virtual WModuleMetaInformation::ConstSPtr	getMetaInformation () const
	The meta information of this module. More...

const std::string &	getUUID () const
	Get the UUID of the module instance. More...

WPropString	getRuntimeName () const
	Returns the name the user has given this module. More...

const WRequirement *	checkRequirements () const
	This method checks whether all the requirements of the module are complied. More...

virtual boost::signals2::connection	subscribeSignal (THREAD_SIGNAL signal, t_ThreadErrorSignalHandlerType notifier)
	Connects a specified notify function with a signal this thread instance is offering. More...

Public Member Functions inherited from WThreadedRunner
	WThreadedRunner ()
	Default constructor. More...

virtual	~WThreadedRunner ()
	Destructor. More...

virtual void	run ()
	Run thread. More...

void	run (THREADFUNCTION f)
	Run thread. More...

void	wait (bool requestFinish=false)
	Wait for the thread to be finished. More...

virtual void	requestStop ()
	This method's purpose is to request a stop without waiting for it. More...

virtual boost::signals2::connection	subscribeSignal (THREAD_SIGNAL signal, t_ThreadErrorSignalHandlerType notifier)
	Connects a specified notify function with a signal this thread instance is offering. More...

const WBoolFlag &	isCrashed () const
	Checks whether this thread has been crashed. More...

const std::string &	getCrashMessage () const
	Get the message of the exception finally causing the crash. More...

void	setThreadName (std::string name)
	Set the name of the thread. More...

std::string	getThreadName () const
	Returns the current thread name. More...

Public Member Functions inherited from WPrototyped
	WPrototyped ()
	Default constructor. More...

virtual	~WPrototyped ()
	Destructor. More...

template<typename T >
bool	isA ()
	Checks whether the actual prototype has the specified runtime type. More...

Protected Member Functions
virtual void	moduleMain ()
	Entry point after loading the module. More...

virtual void	connectors ()
	Initialize the connectors this module is using. More...

virtual void	properties ()
	Initialize the properties for this module. More...

boost::array< std::shared_ptr< WDataSetScalar >, 2 >	generateDatasets (std::shared_ptr< const WDataSetFibers > tracts, std::shared_ptr< const WFiberCluster > cluster) const
	Generates a intensity dataset where each tract is rasterized into. More...

void	updateCenterLine ()
	Removes or inserts geode for the center line of the current cluster into this modules group node. More...

osg::ref_ptr< osg::Node >	genDataSetGeode (std::shared_ptr< WDataSetScalar > dataset) const
	Builds an OSG geode where all voxels inside the dataSet which are not zero are drawn as cuboids. More...

void	raster (std::shared_ptr< WRasterAlgorithm > algo, std::shared_ptr< const WDataSetFibers > tracts, std::shared_ptr< const WFiberCluster > cluster) const
	Performs rasterization with the given algorithm on either all tracts or only a subset if given. More...

WBoundingBox	createBoundingBox (const WFiberCluster &cluster) const
	Creates two vertices describing the bounding box of a cluster. More...

std::shared_ptr< WGridRegular3D >	constructGrid (std::shared_ptr< const WDataSetFibers > tracts, std::shared_ptr< const WFiberCluster > cluster) const
	Constructs a grid out of the current tract dataset or out of a subset (selection) of this dataset. More...

std::shared_ptr< WFiber >	longestLine (std::shared_ptr< const WDataSetFibers > tracts, std::shared_ptr< const WFiberCluster > cluster=std::shared_ptr< const WFiberCluster >()) const
	Finds and returns a copy of the longest line (in term of #points) in the dataset, or in a subset of it specified by the given cluster. More...

std::shared_ptr< WFiber >	centerLine (std::shared_ptr< const WDataSetFibers > tracts, std::shared_ptr< const WFiberCluster > cluster=std::shared_ptr< const WFiberCluster >()) const
	Finds and returns a copy of the center line in the dataset, or in a subset of it specified by the given cluster. More...

Protected Member Functions inherited from WModule
void	threadMain ()
	Thread entry point. More...

virtual void	onThreadException (const WException &e)
	This method is called if an exception was caught, which came from the custom thread code. More...

void	setAssociatedContainer (std::shared_ptr< WModuleContainer > container)
	Sets the container this module is associated with. More...

virtual void	requirements ()
	Initialize requirements in this function. More...

virtual std::string	deprecated () const
	This function allows module programmers to mark their modules deprecated in a user-friendly way. More...

void	initialize ()
	Manages initialization. More...

virtual void	cleanup ()
	Called whenever the module should shutdown. More...

void	addConnector (std::shared_ptr< WModuleInputConnector > con)
	Adds the specified connector to the list of inputs. More...

void	addConnector (std::shared_ptr< WModuleOutputConnector > con)
	Adds the specified connector to the list of outputs. More...

void	removeConnectors ()
	Removes all connectors properly. More...

virtual void	activate ()
	Callback for m_active. More...

virtual const t_GenericSignalHandlerType	getSignalHandler (MODULE_CONNECTOR_SIGNAL signal)
	Gives the signal handler function responsible for a given signal. More...

virtual void	notifyConnectionEstablished (std::shared_ptr< WModuleConnector > here, std::shared_ptr< WModuleConnector > there)
	Gets called whenever a connector gets connected to the specified input. More...

virtual void	notifyConnectionClosed (std::shared_ptr< WModuleConnector > here, std::shared_ptr< WModuleConnector > there)
	Gets called whenever a connection between a remote and local connector gets closed. More...

virtual void	notifyDataChange (std::shared_ptr< WModuleConnector > input, std::shared_ptr< WModuleConnector > output)
	Gets called when the data on one input connector changed. More...

void	ready ()
	Call this whenever your module is ready and can react on property changes. More...

wlog::WStreamedLogger	infoLog () const
	Logger instance for comfortable info logging. More...

wlog::WStreamedLogger	debugLog () const
	Logger instance for comfortable debug logging. More...

wlog::WStreamedLogger	warnLog () const
	Logger instance for comfortable warning- logs. More...

wlog::WStreamedLogger	errorLog () const
	Logger instance for comfortable error logging. More...

void	setLocalPath (boost::filesystem::path path)
	Sets the local module path. More...

void	setLibPath (boost::filesystem::path path)
	Set the path to the library which contains this module. More...

void	setPackageName (std::string name)
	Set the package name. More...

Protected Member Functions inherited from WThreadedRunner
virtual void	notifyStop ()
	Gets called when the thread should be stopped. More...

void	yield () const
	Give remaining execution timeslice to another thread. More...

void	sleep (const int32_t t) const
	Sets thread asleep. More...

void	msleep (const int32_t t) const
	Sets thread asleep. More...

void	waitForStop ()
	Let the thread sleep until a stop request was given. More...

void	handleDeadlyException (const WException &e, std::string sender="WThreadedRunner")
	Handle the specified exception which was not caught in the thread, which basically means the thread has crashed. More...

Private Attributes
std::shared_ptr< WModuleInputData< const WDataSetFibers > >	m_tractIC
	Input connector for a fiber dataset. More...

std::shared_ptr< WModuleInputData< const WFiberCluster > >	m_clusterIC
	Input connector for an optional selection of some fibers in the fiber dataset via a cluster. More...

std::shared_ptr< WModuleOutputData< WDataSetScalar > >	m_voxelizedOC
	Output connector for a voxelized cluster. More...

std::shared_ptr< WModuleOutputData< WDataSetScalar > >	m_paramOC
	Output providing parameterization to other algorithms. More...

std::shared_ptr< const WDataSetFibers >	m_tracts
	Reference to the fiber dataset. More...

osg::ref_ptr< WGEManagedGroupNode >	m_rootNode
	OSG root node for this module. More...

std::shared_ptr< WCondition >	m_fullUpdate
	module is performing an expensive update More...

WPropBool	m_antialiased
	Enable/disable anti-aliased rasterization of voxels. More...

WPropBool	m_renderingActive
	Enable/disable rendering of voxels. More...

WPropSelection	m_rasterAlgo
	List for selecting the rasterization method. More...

WPropDouble	m_voxelsPerUnit
	The number of voxels per unit in the coordinate system. More...

std::shared_ptr< WItemSelection >	m_paramAlgoSelections
	The available parameterization algorithms. More...

WPropSelection	m_parameterAlgo
	The actually selected parameterization algorithm. More...

WPropBool	m_colorMapping
	add colormapping More...

WPropBool	m_phongShading
	Add lighting to the scene. More...

Friends
class	WMVoxelizerTest
	Only UnitTests may be friends. More...

Additional Inherited Members
Public Types inherited from WModule
typedef std::vector< std::shared_ptr< WModuleInputConnector > >	InputConnectorList
	The type for the list of input connectors. More...

typedef std::vector< std::shared_ptr< WModuleOutputConnector > >	OutputConnectorList
	The type for the list of output connectors. More...

typedef std::shared_ptr< WModule >	SPtr
	Shared pointer to a WModule. More...

typedef std::shared_ptr< const WModule >	ConstSPtr
	Shared pointer to a const WModule. More...

Public Types inherited from WThreadedRunner
typedef std::shared_ptr< WThreadedRunner >	SPtr
	Abbreviation to a shared_ptr to this type. More...

typedef std::shared_ptr< const WThreadedRunner >	ConstSPtr
	Abbreviation to a const shared_ptr to this type. More...

typedef boost::function< void(void) >	THREADFUNCTION
	Type used for simple thread functions. More...

Static Public Member Functions inherited from WModule
static SPtr	findByUUID (std::string uuid)
	Find a module instance by UUID. More...

Static Public Member Functions inherited from WThreadedRunner
static void	setThisThreadName (std::string name)
	Static function to set the name of the calling thread. More...

Protected Types inherited from WModule
typedef std::vector< WRequirement * >	Requirements
	The type of the requirement list. More...

Protected Attributes inherited from WModule
std::shared_ptr< WProperties >	m_properties
	The property object for the module. More...

std::shared_ptr< WProperties >	m_infoProperties
	The property object for the module containing only module whose purpose is "PV_PURPOSE_INFORMNATION". More...

std::shared_ptr< WProgressCombiner >	m_progress
	Progress indicator used as parent for all progress' of this module. More...

WBoolFlag	m_initialized
	True if everything is initialized and ready to be used. More...

WBoolFlag	m_isAssociated
	True if container got associated with this flag. More...

WBoolFlag	m_isUsable
	True if associated && initialized. More...

WBoolFlag	m_isReady
	True if ready() was called. More...

WBoolFlag	m_isReadyOrCrashed
	It is true whenever m_isReady or WThreadedRunner::m_isCrashed is true. More...

WBoolFlag	m_isRunning
	True if the module currently is running. More...

WBoolFlag	m_isLoadFinished
	Flag to denote whether the module container and the project loader have finished their work. More...

bool	m_restoreMode
	Flag denoting the current restore mode. More...

std::shared_ptr< WProgress >	m_readyProgress
	Progress indicator for the "ready" state. More...

WConditionSet	m_moduleState
	The internal state of the module. More...

std::shared_ptr< WModuleContainer >	m_container
	The container this module belongs to. More...

InputConnectorList	m_inputConnectors
	Set of input connectors associated with this module. More...

OutputConnectorList	m_outputConnectors
	Set of output connectors associated with this module. More...

WPropBool	m_active
	True whenever the module should be active. More...

WPropString	m_runtimeName
	This property holds a user specified name for the current module instance. More...

boost::filesystem::path	m_localPath
	The path where the module binary resides in. More...

boost::filesystem::path	m_libPath
	The absolute path to the library containing this module. More...

std::string	m_packageName
	The name of the lib/the package containing this module. More...

Requirements	m_requirements
	The list of requirements. More...

Protected Attributes inherited from WThreadedRunner
boost::thread	m_thread
	Thread instance. More...

WBoolFlag	m_shutdownFlag
	Condition getting fired whenever the thread should quit. More...

WBoolFlag	m_isCrashed
	True whenever an exception is thrown during threadMain. More...

std::string	m_crashMessage
	The crash message. More...

Detailed Description

Traces a given set of deterministic tracts as given by a dataset of deterministic tracts (optionally only a subset may be processed) in a voxel-wise manner.

Every voxel which is hit by one or more tracts or tract-segments is marked with a scalar and stored in a dataset scalar.

Definition at line 50 of file WMVoxelizer.h.

Constructor & Destructor Documentation

◆ WMVoxelizer()

WMVoxelizer::WMVoxelizer ( )

Default Constructor.

Definition at line 68 of file WMVoxelizer.cpp.

Referenced by factory().

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◆ ~WMVoxelizer()

WMVoxelizer::~WMVoxelizer ( )

virtual

Default Destructor.

Definition at line 74 of file WMVoxelizer.cpp.

Member Function Documentation

◆ centerLine()

std::shared_ptr< WFiber > WMVoxelizer::centerLine	(	std::shared_ptr< const WDataSetFibers >	tracts,
		std::shared_ptr< const WFiberCluster >	cluster = `std::shared_ptr< const WFiberCluster >()`
	)		const

protected

Finds and returns a copy of the center line in the dataset, or in a subset of it specified by the given cluster.

If the cluster is empty all tracts are considered.

Parameters

tracts	The dataset of tracts.
cluster	A subset of tracts.

Note: This involves heavy computational time, including dataset convertion to WDataSetFiberVector, since I didn't had the time to use the crappy index lists of the original WDataSetFibers.

Returns: A reference of a copy of the center line.

Definition at line 311 of file WMVoxelizer.cpp.

Referenced by generateDatasets().

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◆ connectors()

void WMVoxelizer::connectors ( )

protectedvirtual

Initialize the connectors this module is using.

Reimplemented from WModule.

Definition at line 116 of file WMVoxelizer.cpp.

References WModule::connectors(), WModuleInputData< T >::createAndAdd(), WModuleOutputData< T >::createAndAdd(), m_clusterIC, m_paramOC, m_tractIC, and m_voxelizedOC.

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◆ constructGrid()

std::shared_ptr< WGridRegular3D > WMVoxelizer::constructGrid	(	std::shared_ptr< const WDataSetFibers >	tracts,
		std::shared_ptr< const WFiberCluster >	cluster
	)		const

protected

Constructs a grid out of the current tract dataset or out of a subset (selection) of this dataset.

Parameters

tracts	Dataset of deterministic tracts.
cluster	Optional subselection of tracts.

Returns: A WGridRegular3D reference wherein the voxels may be marked.

Definition at line 203 of file WMVoxelizer.cpp.

References WModule::debugLog(), WBoundingBoxImpl< VT >::getMin(), m_voxelsPerUnit, and WMatrix< T >::makeIdentity().

Referenced by generateDatasets().

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◆ createBoundingBox()

WBoundingBox WMVoxelizer::createBoundingBox ( const WFiberCluster & cluster ) const

protected

Creates two vertices describing the bounding box of a cluster.

Parameters

cluster With its fibers

Returns: The axis aligned bounding box.

◆ factory()

std::shared_ptr< WModule > WMVoxelizer::factory ( ) const

virtual

Due to the prototype design pattern used to build modules, this method returns a new instance of this method.

NOTE: it should never be initialized or modified in some other way. A simple new instance is required.

Returns: The prototype used to create every module in OpenWalnut.

Implements WModule.

Definition at line 78 of file WMVoxelizer.cpp.

References WMVoxelizer().

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◆ genDataSetGeode()

osg::ref_ptr< osg::Node > WMVoxelizer::genDataSetGeode ( std::shared_ptr< WDataSetScalar > dataset ) const

protected

Builds an OSG geode where all voxels inside the dataSet which are not zero are drawn as cuboids.

Parameters

dataset The dataset which should be drawn

Returns: OSG node with the voxels as cuboids.

Definition at line 348 of file WMVoxelizer.cpp.

References wge::createCube(), and WModule::errorLog().

Referenced by moduleMain().

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◆ generateDatasets()

boost::array< std::shared_ptr< WDataSetScalar >, 2 > WMVoxelizer::generateDatasets	(	std::shared_ptr< const WDataSetFibers >	tracts,
		std::shared_ptr< const WFiberCluster >	cluster
	)		const

protected

Generates a intensity dataset where each tract is rasterized into.

If additionally the (optional) cluster is given as subselection only tracts with IDs inside this dataset are considered. If additionally a parameterization was selected also a corresponding dataset will be generated and returned.

Parameters

tracts	Dataset of deterministic tracts.
cluster	Optional selection of a subset of tracts.

Returns: Two references to datasets where the intensity field is always the first and should be always present, but not when an error has occured. Since parameterization is optional, the second dataset will only be generated when a parameterization algo has been selected first.

Definition at line 242 of file WMVoxelizer.cpp.

References centerLine(), constructGrid(), WModule::debugLog(), WModule::errorLog(), longestLine(), m_antialiased, m_parameterAlgo, m_rasterAlgo, and raster().

Referenced by moduleMain().

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◆ getDescription()

const std::string WMVoxelizer::getDescription ( ) const

inlinevirtual

Gives back a description of this module.

Returns: Description to module.

Implements WPrototyped.

Definition at line 274 of file WMVoxelizer.h.

◆ getName()

const std::string WMVoxelizer::getName ( ) const

inlinevirtual

Gives back the name of this module.

Returns: the module's name.

Implements WPrototyped.

Definition at line 269 of file WMVoxelizer.h.

◆ longestLine()

std::shared_ptr< WFiber > WMVoxelizer::longestLine	(	std::shared_ptr< const WDataSetFibers >	tracts,
		std::shared_ptr< const WFiberCluster >	cluster = `std::shared_ptr< const WFiberCluster >()`
	)		const

protected

Finds and returns a copy of the longest line (in term of #points) in the dataset, or in a subset of it specified by the given cluster.

If the cluster is empty all tracts are considered.

Parameters

tracts	The dataset of tracts.
cluster	A subset of tracts.

Note: This involves heavy computational time, including dataset convertion to WDataSetFiberVector, since I didn't had the time to use the crappy index lists of the original WDataSetFibers.

Returns: A reference of a copy of the longest line.

Definition at line 301 of file WMVoxelizer.cpp.

Referenced by generateDatasets().

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◆ moduleMain()

void WMVoxelizer::moduleMain ( )

protectedvirtual

Entry point after loading the module.

Runs in separate thread.

Implements WModule.

Definition at line 126 of file WMVoxelizer.cpp.

References WConditionSet::add(), WGEColormapping::apply(), genDataSetGeode(), generateDatasets(), WKernel::getGraphicsEngine(), WKernel::getRunningKernel(), WModule::infoLog(), WModule::m_active, m_clusterIC, m_colorMapping, m_fullUpdate, WModule::m_localPath, WModule::m_moduleState, m_paramOC, m_phongShading, WModule::m_properties, m_renderingActive, m_rootNode, WThreadedRunner::m_shutdownFlag, m_tractIC, m_voxelizedOC, WModule::ready(), WConditionSet::setResetable(), and WConditionSet::wait().

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◆ properties()

void WMVoxelizer::properties ( )

protectedvirtual

Initialize the properties for this module.

Reimplemented from WModule.

Definition at line 83 of file WMVoxelizer.cpp.

References WPropertyHelper::PC_SELECTONLYONE::addTo(), WPropertyHelper::PC_NOTEMPTY::addTo(), m_antialiased, m_colorMapping, m_fullUpdate, m_paramAlgoSelections, m_parameterAlgo, m_phongShading, WModule::m_properties, m_rasterAlgo, m_renderingActive, m_voxelsPerUnit, and WModule::properties().

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◆ raster()

void WMVoxelizer::raster	(	std::shared_ptr< WRasterAlgorithm >	algo,
		std::shared_ptr< const WDataSetFibers >	tracts,
		std::shared_ptr< const WFiberCluster >	cluster
	)		const

protected

Performs rasterization with the given algorithm on either all tracts or only a subset if given.

Parameters

algo	The algorithm which actually rasters every fiber.
tracts	Dataset of tracts.
cluster	A subset of tracts.

Definition at line 321 of file WMVoxelizer.cpp.

Referenced by generateDatasets().

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◆ updateCenterLine()

void WMVoxelizer::updateCenterLine ( )

protected

Removes or inserts geode for the center line of the current cluster into this modules group node.

Friends And Related Function Documentation

◆ WMVoxelizerTest

friend class WMVoxelizerTest

friend

Only UnitTests may be friends.

Definition at line 55 of file WMVoxelizer.h.

Member Data Documentation

◆ m_antialiased

WPropBool WMVoxelizer::m_antialiased

private

Enable/disable anti-aliased rasterization of voxels.

Definition at line 233 of file WMVoxelizer.h.

Referenced by generateDatasets(), and properties().

◆ m_clusterIC

std::shared_ptr< WModuleInputData< const WFiberCluster > > WMVoxelizer::m_clusterIC

private

Input connector for an optional selection of some fibers in the fiber dataset via a cluster.

Definition at line 205 of file WMVoxelizer.h.

Referenced by connectors(), and moduleMain().

◆ m_colorMapping

WPropBool WMVoxelizer::m_colorMapping

private

add colormapping

Definition at line 261 of file WMVoxelizer.h.

Referenced by moduleMain(), and properties().

◆ m_fullUpdate

std::shared_ptr< WCondition > WMVoxelizer::m_fullUpdate

private

module is performing an expensive update

Definition at line 231 of file WMVoxelizer.h.

Referenced by moduleMain(), and properties().

◆ m_paramAlgoSelections

std::shared_ptr< WItemSelection > WMVoxelizer::m_paramAlgoSelections

private

The available parameterization algorithms.

Definition at line 251 of file WMVoxelizer.h.

Referenced by properties().

◆ m_parameterAlgo

WPropSelection WMVoxelizer::m_parameterAlgo

private

The actually selected parameterization algorithm.

Definition at line 256 of file WMVoxelizer.h.

Referenced by generateDatasets(), and properties().

◆ m_paramOC

std::shared_ptr< WModuleOutputData< WDataSetScalar > > WMVoxelizer::m_paramOC

private

Output providing parameterization to other algorithms.

It provides a scalar field which gets filled with the parameterization of the fibers, i.e. current integrated length.

Definition at line 216 of file WMVoxelizer.h.

Referenced by connectors(), and moduleMain().

◆ m_phongShading

WPropBool WMVoxelizer::m_phongShading

private

Add lighting to the scene.

Definition at line 266 of file WMVoxelizer.h.

Referenced by moduleMain(), and properties().

◆ m_rasterAlgo

WPropSelection WMVoxelizer::m_rasterAlgo

private

List for selecting the rasterization method.

Note: At the moment there is only Bresenham, but this might change.

Definition at line 241 of file WMVoxelizer.h.

Referenced by generateDatasets(), and properties().

◆ m_renderingActive

WPropBool WMVoxelizer::m_renderingActive

private

Enable/disable rendering of voxels.

Definition at line 234 of file WMVoxelizer.h.

Referenced by moduleMain(), and properties().

◆ m_rootNode

osg::ref_ptr< WGEManagedGroupNode > WMVoxelizer::m_rootNode

private

OSG root node for this module.

Definition at line 226 of file WMVoxelizer.h.

Referenced by moduleMain().

◆ m_tractIC

std::shared_ptr< WModuleInputData< const WDataSetFibers > > WMVoxelizer::m_tractIC

private

Input connector for a fiber dataset.

Definition at line 200 of file WMVoxelizer.h.

Referenced by connectors(), and moduleMain().

◆ m_tracts

std::shared_ptr< const WDataSetFibers > WMVoxelizer::m_tracts

private

Reference to the fiber dataset.

Definition at line 221 of file WMVoxelizer.h.

◆ m_voxelizedOC

std::shared_ptr< WModuleOutputData< WDataSetScalar > > WMVoxelizer::m_voxelizedOC

private

Output connector for a voxelized cluster.

Definition at line 210 of file WMVoxelizer.h.

Referenced by connectors(), and moduleMain().

◆ m_voxelsPerUnit

WPropDouble WMVoxelizer::m_voxelsPerUnit

private

The number of voxels per unit in the coordinate system.

Definition at line 246 of file WMVoxelizer.h.

Referenced by constructGrid(), and properties().

The documentation for this class was generated from the following files:

Public Member Functions

Protected Member Functions

Private Attributes

Friends

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ WMVoxelizer()

◆ ~WMVoxelizer()

Member Function Documentation

◆ centerLine()

◆ connectors()

◆ constructGrid()

◆ createBoundingBox()

◆ factory()

◆ genDataSetGeode()

◆ generateDatasets()

◆ getDescription()

◆ getName()

◆ longestLine()

◆ moduleMain()

◆ properties()

◆ raster()

◆ updateCenterLine()

Friends And Related Function Documentation

◆ WMVoxelizerTest

Member Data Documentation

◆ m_antialiased

◆ m_clusterIC

◆ m_colorMapping

◆ m_fullUpdate

◆ m_paramAlgoSelections

◆ m_parameterAlgo

◆ m_paramOC

◆ m_phongShading

◆ m_rasterAlgo

◆ m_renderingActive

◆ m_rootNode

◆ m_tractIC

◆ m_tracts

◆ m_voxelizedOC

◆ m_voxelsPerUnit